姚文，男，汉族，1987年10月，中共党员，博士，副教授，硕士生导师。
研究领域：生物信息学、玉米遗传育种
所授课程：生物信息学
Email：yaowen@henau.edu.cn
 
教育与研究/工作经历：
2006.09 – 2010.06，武汉大学，信息与计算科学专业，理学学士学位；
2010.09 – 2016.12，华中农业大学，生物化学与分子生物学专业，理学博士学位；
2017.06 – 2018.06，河南农业大学，生命科学学院，讲师，校青年英才；
2018.06 – 2022.01，河南农业大学，生命科学学院，讲师，校拔尖人才，校聘教授；
2022.01 – 2025.04，河南农业大学，生命科学学院，副教授，校拔尖人才，校聘教授；
2025.04 – 今，河南农业大学，农学院，副教授，校拔尖人才，校聘教授。
 
承担项目与课题：
（1）国家自然科学基金青年基金，水稻剑叶中参与小RNA生物合成过程的关键基因的鉴定及功能研究，2020-01至2022-12，结题，主持
（2）河南省科技攻关项目，水稻籽粒中小RNA表达的遗传分析及调控水稻产量和品质性状的小RNA的功能研究，2020-01至2021-12，结题，主持
（3）河南省高等学校重点科研项目，基于全基因组关联分析解析控制小麦籽粒中醇溶蛋白含量的关键调控基因及应用，2020-01至2021-12，结题，主持
（4）河南省自然科学基金面上项目，一条长链反向重复序列及其形成的小RNA调控水稻抗白叶枯病的机制研究，2023-01至2024-12，结题，主持
（5）河南省自然科学基金面上项目，长链反向重复序列OsLIR21716及其生成的小RNA调控水稻抗白叶枯病和稻瘟病的功能研究，2024-01至2025-12，在研，主持
（6）河南省自然科学基金面上项目，非编码基因OsLIR21716在水稻抵抗白叶枯病菌中的功能和分子机制研究，2025-01至2026-12，在研，主持
（7）河南省重点研发专项子课题，优质专用高产小麦新品种选育关键技术研究及应用，2024-01至2026-12，在研，主持
（8）河南省农科院小麦国家工程实验室开放课题，基于关联分析克隆控制小麦面筋蛋白组分含量的关键调控基因及应用，2018-10至2020-09，结题，主持
（9）河南农业大学拔尖人才启动项目，2018-06至2023-06，结题，主持
（10）河南省省级科技研发计划联合基金，小麦面筋品质主效基因qGlu.1D的克隆与作用机制研究，2022-06至2024-05，结题，参与
（11）河南省高等教育教学改革研究与实践项目，新农科背景下涉农专业基础课程思政建设的研究与实践——以植物学课程为例，2021-01至2023-12，结题，参与
 
 
成果：
 
代表性论文：
(1) Xiang Luo+, Zhenyang Shua+, Diguang Zhao, Beibei Liu, Hua Luo, Ying Chen, Dong Meng, Zhihua Song, Qing Yang, Zicheng Wang, Dong Tang, Xingguo Zhang, Juan Zhang*, Kai Ma*, Wen Yao*. Genome assembly of pomegranate highlights structural variations driving population differentiation and key loci underpinning cold adaption. Horticulture Research, 2025
(2) Abdul Sami+, Mengjia Fu+, Haoqiang Yin+, Usman Ali, Lei Tian, Shunxi Wang, Jinghua Zhang, Xueyan Chen, Hehuan Li, Minghui Chen, Wen Yao*, Liuji Wu*. NCPbook: a comprehensive database of non-canonical peptides. Plant Physiology, 2024
(3) Yazhou Wang+, Lihua Jia+, Ge Tian, Yihan Dong, Xiao Zhang, Zhengfu Zhou, Xiang Luo, Yang Li, Wen Yao*. shinyCircos-V2.0: leveraging the creation of Circos plot with enhanced usability and advanced features. iMeta, 2023
(4) Haoran Li+, Tiantian Chen+, Lihua Jia+, Zhizhan Wang, Jiaming Li, Yazhou Wang, Mengjia Fu, Mingming Chen, Yuping Wang, Fangfang Huang, Yingru Jiang, Tao Li, Zhengfu Zhou, Yang Li*, Wen Yao*, Yihan Wang*. SoybeanGDB: a comprehensive genomic and bioinformatic platform for soybean genetics and genomics. Computational and Structural Biotechnology Journal, 2023
(5) Fangfang Huang+, Yingru Jiang+, Tiantian Chen+, Haoran Li, Mengjia Fu, Yazhou Wang, Yufang Xu, Yang Li, Zhengfu Zhou, Lihua Jia, Yidan Ouyang, Wen Yao*. New data and new features of the funRiceGenes (functionally characterized rice genes) database: 2021 update. Rice, 2022
(6) Lihua Jia+, Yang Li+, Fangfang Huang, Yingru Jiang, Haoran Li, Zhizhan Wang, Tiantian Chen, Jiaming Li, Zhang Zhang*, Wen Yao*. LIRBase: a comprehensive database of long inverted repeats in eukaryotic genomes. Nucleic Acids Research, 2021
(7) Lihua Jia+, Wen Yao+,*, Yingru Jiang, Yang Li, Zhizhan Wang, Haoran Li, Fangfang Huang, Jiaming Li, Tiantian Chen, Huiyong Zhang*. Development of interactive biological web applications with R/Shiny. Briefings in Bioinformatics, 2021
(8) Xin Wang+, Xin Yan+, Xiaoxiao Tian+, Zongfei Zhang, Weiwei Wu, Junjun Shang, Jiexiu Ouyang, Wen Yao*, Shaobo Li*. Glycine-and proline-rich protein OsGPRP3 regulates grain size and quality in rice. Journal of Agricultural and Food Chemistry, 2020
(9) Lihua Jia+, Na Liu+, Fangfang Huang, Zhengfu Zhou, Xin He, Haoran Li, Zhizhan Wang, Wen Yao*. intansv: an R package for integrative analysis of structural variations. PeerJ, 2020
(10) Congcong Liu+, Zhengfu Zhou+, Zhengqing Wu, Maomao Qin, Xia Shi, Yahuan Wang, Wenxu Li, Wen Yao*, Zhensheng Lei*, Renyong Zhao*. In-depth genetic analysis reveals conditioning of polyphenol oxidase activity in wheat grains by cis regulation of TaPPO2A-1 expression level. Genomics, 2020
(11) Wen Yao*, Yang Li, Weibo Xie, Lei Wang. Features of sRNA biogenesis in rice revealed by genetic dissection of sRNA expression level. Computational and Structural Biotechnology Journal, 2020
(12) Wen Yao+, Guangwei Li+, Yanru Cui, Yiming Yu, Qifa Zhang*, Shizhong Xu*. Mapping quantitative trait loci using binned genotypes. Journal of Genetics and Genomics, 2019
(13) Wen Yao*, Fangfang Huang, Xuehai Zhang, Jihua Tang*. ECOGEMS: efficient compression and retrieve of SNP data of 2058 rice accessions with integer sparse matrices. Bioinformatics, 2019
(14) Yiming Yu+, Wen Yao+,*, Yuping Wang, Fangfang Huang. shinyChromosome: An R/Shiny Application for Interactive Creation of Non-circular Plots of Whole Genomes. Genomics, Proteomics & Bioinformatics, 2019
(15) Wei Zhou, Lei Wang, Wenming Zheng*, Wen Yao*. MaizeSNPDB: a comprehensive database for efficient retrieve and analysis of SNPs among 1210 maize lines. Computational and Structural Biotechnology Journal, 2019
(16) Wen Yao*, Guangwei Li, Yiming Yu, Yidan Ouyang*. funRiceGenes dataset for comprehensive understanding and application of rice functional genes. GigaScience, 2017
(17) Yiming Yu, Yidan Ouyang*, Wen Yao*. shinyCircos: an R/Shiny application for interactive creation of Circos plot. Bioinformatics, 2017
(18) Wen Yao, Guangwei Li, Hu Zhao, Gongwei Wang, Xingming Lian, Weibo Xie*. Exploring the rice dispensable genome using a metagenome-like assembly strategy. Genome Biology, 2015
(19) Jia Wang+, Wen Yao+, Dan Zhu, Weibo Xie, Qifa Zhang*. Genetic basis of sRNA quantitative variation analyzed using an experimental population derived from an elite rice hybrid. eLife, 2015
 
专利：
(1) 周正富，姚文，张紫薇，吴政卿，雷振生，李文旭，秦毛毛，杨攀。麦谷蛋白及其亚基含量连锁标记Whass115339。ZL 2021 1 0975560.9。
(2) 周正富，秦毛毛，姚文，吴政卿，雷振生，管慧月，侯锦娜。小麦籽粒过氧化物酶活性关联位点qPOD-2A标记。ZL 2021 1 1270692.8。
 
奖励与荣誉：
（1）河南省本科高等教育教学成果二等奖，新农科背景下涉农专业基础课程思政建设的研究与实践——以植物学课程为例，第二。